Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | M5M_RS14375 | Q21H69 | - | 3177235 - 3177984 | 27674.4 |
| efflux rnd transporter permease subunit | M5M_RS14380 | Not Available | - | 3178113 - 3181217 | 111567.0 |
| efflux rnd transporter periplasmic adaptor subunit | M5M_RS14385 | Q8FWV8 | - | 3181221 - 3182387 | 41774.6 |
| gamma-butyrobetaine hydroxylase-like domain-containing protein | M5M_RS14390 | Not Available | - | 3182413 - 3182787 | 14294.1 |
| methyl-accepting chemotaxis protein | M5M_RS20405 | A5W2C8 | - | 3182842 - 3184014 | 41684.0 |
| atp-dependent protease atpase subunit hslu | M5M_RS14400 | B3PI65 | - | 3184124 - 3185446 | 48798.6 |
| atp-dependent protease subunit hslv | M5M_RS14405 | C5BRK9 | - | 3185446 - 3185970 | 18423.0 |
| spor domain-containing protein | M5M_RS14410 | Not Available | - | 3186025 - 3186576 | 20654.9 |
| primosomal protein n' | M5M_RS14415 | P17888 | - | 3186969 - 3189158 | 81177.7 |
| 50s ribosomal protein l31 | M5M_RS19990 | A4SHF6 | + | 3189308 - 3189520 | 7792.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.