Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4198 domain-containing protein | M5M_RS14275 | Not Available | + | 3158373 - 3159203 | 30637.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | M5M_RS14280 | P31570 | + | 3159251 - 3159853 | 22337.7 |
| pitrilysin family protein | M5M_RS14285 | O25656 | + | 3159969 - 3162707 | 100427.0 |
| lyttr family dna-binding domain-containing protein | M5M_RS14290 | Q82Z76 | - | 3162761 - 3163471 | 26815.5 |
| sensor histidine kinase | M5M_RS19670 | Q4L8V3 | - | 3163468 - 3164568 | 40714.7 |
| serine hydrolase | M5M_RS14300 | Not Available | - | 3164600 - 3166429 | 66426.1 |
| cobyric acid synthase | M5M_RS14305 | Q21P75 | + | 3166570 - 3168033 | 51975.2 |
| pep-cterm sorting domain-containing protein | M5M_RS20520 | Not Available | - | 3168082 - 3168858 | 26978.2 |
| hypothetical protein | M5M_RS14315 | Not Available | + | 3169186 - 3169749 | 21045.1 |
| alpha/beta fold hydrolase | M5M_RS14320 | O83041 | + | 3169749 - 3170726 | 36251.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.