Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | M5M_RS14225 | Not Available | - | 3145675 - 3146511 | 30405.6 |
| tonb-dependent receptor domain-containing protein | M5M_RS14230 | Q6LLU3 | + | 3147004 - 3148872 | 67246.4 |
| amidohydrolase | M5M_RS14235 | A0A0F7GG06 | + | 3149072 - 3150478 | 50600.3 |
| amidohydrolase family protein | M5M_RS14240 | Not Available | + | 3150475 - 3151731 | 44336.9 |
| duf2799 domain-containing protein | M5M_RS19665 | Not Available | + | 3151833 - 3152555 | 26698.1 |
| m28 family peptidase | M5M_RS14250 | Q6GQ29 | - | 3153003 - 3154352 | 48460.8 |
| hypothetical protein | M5M_RS14255 | Not Available | + | 3154475 - 3155188 | 26603.9 |
| tonb-dependent receptor domain-containing protein | M5M_RS14260 | Q2YJB2 | + | 3155275 - 3157239 | 71231.4 |
| pepsy-associated tm helix domain-containing protein | M5M_RS14265 | Not Available | + | 3157306 - 3157896 | 22612.2 |
| duf2271 domain-containing protein | M5M_RS14270 | Not Available | + | 3157893 - 3158360 | 17698.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.