Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf6316 family protein | M5M_RS14020 | Not Available | - | 3105299 - 3105526 | 8492.96 |
| divergent polysaccharide deacetylase family protein | M5M_RS14025 | P44863 | - | 3105756 - 3106538 | 28846.7 |
| s41 family peptidase | M5M_RS14030 | Q44879 | - | 3106565 - 3107971 | 50596.2 |
| murein hydrolase activator envc | M5M_RS14035 | Q9JZ20 | - | 3108092 - 3108895 | 29675.5 |
| hypothetical protein | M5M_RS14040 | Not Available | - | 3108967 - 3109242 | 10289.5 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | M5M_RS14045 | B3PGV8 | - | 3109297 - 3110844 | 55192.2 |
| rhodanese-like domain-containing protein | M5M_RS14050 | Not Available | + | 3111006 - 3111422 | 15432.8 |
| glutaredoxin 3 | M5M_RS14055 | Q9HU55 | + | 3111495 - 3111758 | 9741.77 |
| protein-export chaperone secb | M5M_RS14060 | C5BJ23 | + | 3111852 - 3112358 | 18237.8 |
| autotransporter assembly complex family protein | M5M_RS14065 | D2TN56 | + | 3112474 - 3114204 | 64427.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.