Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | M5M_RS13920 | Not Available | + | 3089018 - 3089431 | 15488.1 |
| superinfection immunity protein | M5M_RS13925 | Not Available | + | 3089441 - 3089686 | 8711.88 |
| osmc family protein | M5M_RS13930 | Not Available | - | 3089790 - 3090239 | 15960.7 |
| hypothetical protein | M5M_RS13935 | Not Available | + | 3090592 - 3090822 | 8513.78 |
| hypothetical protein | M5M_RS13940 | Not Available | + | 3090951 - 3091382 | 15584.9 |
| voc family protein | M5M_RS13945 | P45871 | + | 3091385 - 3091771 | 14386.2 |
| hypothetical protein | M5M_RS13950 | Not Available | - | 3091775 - 3092356 | 21838.0 |
| daph/dapd/glmu-related protein | M5M_RS13955 | P77791 | - | 3092381 - 3093103 | 26959.3 |
| s9 family peptidase | M5M_RS13960 | Q84LM4 | - | 3093271 - 3095337 | 75895.3 |
| class i sam-dependent methyltransferase | M5M_RS13965 | K5B7F3 | + | 3095547 - 3096170 | 22558.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.