Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | M5M_RS13870 | Not Available | - | 3080175 - 3081818 | 57963.3 |
| 5-formyltetrahydrofolate cyclo-ligase | M5M_RS13875 | P0AC29 | - | 3081901 - 3082500 | 22509.6 |
| cell division protein zapa | M5M_RS13880 | Q9HTW3 | - | 3082741 - 3083043 | 10790.0 |
| tigr02449 family protein | M5M_RS13885 | Not Available | - | 3083046 - 3083255 | 8045.7 |
| upf0149 family protein | M5M_RS13890 | B1JEZ1 | + | 3083483 - 3084031 | 19442.2 |
| xaa-pro aminopeptidase | M5M_RS13895 | P15034 | + | 3084044 - 3085399 | 50208.1 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | M5M_RS13900 | P25534 | + | 3085440 - 3086681 | 44633.5 |
| ubih/ubif/visc/coq6 family ubiquinone biosynthesis hydroxylase | M5M_RS13905 | P25535 | + | 3086678 - 3087910 | 44610.7 |
| plii family lysozyme inhibitor of i-type lysozyme | M5M_RS13910 | Not Available | + | 3087910 - 3088386 | 16882.8 |
| gnat family n-acetyltransferase | M5M_RS13915 | Not Available | + | 3088408 - 3088890 | 17300.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.