Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yban family protein | M5M_RS13825 | P0AAR6 | - | 3070895 - 3071362 | 16899.3 |
| thioredoxin trxc | M5M_RS13830 | P52228 | + | 3071387 - 3071821 | 15817.2 |
| duf4382 domain-containing protein | M5M_RS13835 | Not Available | + | 3071892 - 3072797 | 31303.5 |
| acyl-coa dehydrogenase family protein | M5M_RS13840 | P79274 | - | 3072800 - 3073945 | 41826.1 |
| abc transporter atp-binding protein/permease | M5M_RS13845 | Q2ULH4 | + | 3074071 - 3075843 | 65380.5 |
| hypothetical protein | M5M_RS20515 | Not Available | - | 3075871 - 3076266 | 13748.8 |
| arac family transcriptional regulator | M5M_RS13855 | Not Available | - | 3076276 - 3077313 | 38766.3 |
| ribose-5-phosphate isomerase rpia | M5M_RS13860 | B0KP28 | - | 3077326 - 3078015 | 24156.9 |
| threonine ammonia-lyase, biosynthetic | M5M_RS13865 | P53607 | + | 3078174 - 3079712 | 55970.6 |
| hypothetical protein | M5M_RS20400 | Not Available | + | 3079929 - 3080066 | 4893.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.