Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate--protein phosphotransferase | M5M_RS01360 | P42014 | + | 291886 - 293532 | 60252.8 |
| hypothetical protein | M5M_RS01365 | Not Available | + | 293642 - 294529 | 33706.8 |
| tryptophan--trna ligase | M5M_RS01370 | Q9JTQ0 | + | 295094 - 296101 | 37388.7 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | M5M_RS01375 | P12995 | - | 296151 - 297434 | 45836.7 |
| duf547 domain-containing protein | M5M_RS01380 | Not Available | + | 297433 - 298239 | 30095.2 |
| flagellar brake protein | M5M_RS01385 | Not Available | - | 298246 - 299022 | 29305.3 |
| trna 2-thiocytidine(32) synthetase ttca | M5M_RS01390 | B3PID5 | + | 299272 - 300192 | 34241.4 |
| lrp/asnc ligand binding domain-containing protein | M5M_RS01395 | Not Available | - | 300281 - 300769 | 18292.2 |
| alanine dehydrogenase | M5M_RS01400 | E1V931 | + | 300946 - 302064 | 39141.6 |
| bifunctional diguanylate cyclase/phosphodiesterase | M5M_RS01405 | Not Available | + | 302308 - 304734 | 90843.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.