Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methionine adenosyltransferase | M5M_RS13450 | B3PGF2 | - | 2995676 - 2996830 | 41440.3 |
| metalloregulator arsr/smtb family transcription factor | M5M_RS13455 | Not Available | - | 2996843 - 2997826 | 36097.9 |
| s8 family serine peptidase | M5M_RS13460 | P42779 | + | 2997963 - 3001049 | 107073.0 |
| energy transducer tonb | M5M_RS13465 | Not Available | - | 3001142 - 3001768 | 23163.9 |
| tonb family protein | M5M_RS13470 | Not Available | - | 3001849 - 3003294 | 52808.2 |
| blai/meci/copy family transcriptional regulator | M5M_RS13475 | Not Available | - | 3003300 - 3003692 | 14483.2 |
| transketolase | M5M_RS13480 | Q9KUP2 | + | 3003957 - 3005957 | 71710.9 |
| type i glyceraldehyde-3-phosphate dehydrogenase | M5M_RS13485 | B8E5U5 | + | 3006144 - 3007172 | 37768.8 |
| phosphoglycerate kinase | M5M_RS13490 | Q0VL87 | + | 3007223 - 3008386 | 40321.7 |
| class ii fructose-bisphosphate aldolase | M5M_RS13495 | O87796 | + | 3008650 - 3009714 | 38312.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.