Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferrochelatase | M5M_RS01305 | A0KL51 | + | 281497 - 282480 | 36663.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | M5M_RS01310 | Q87RD1 | + | 282537 - 283226 | 24486.4 |
| undecaprenyl-diphosphate phosphatase | M5M_RS01315 | Q21II7 | + | 283271 - 284059 | 28386.4 |
| nad(p)-dependent oxidoreductase | M5M_RS01320 | O33730 | + | 284085 - 284966 | 30532.7 |
| voc family protein | M5M_RS01325 | Not Available | + | 284998 - 285390 | 13991.5 |
| m18 family aminopeptidase | M5M_RS01330 | C1DQM8 | + | 285407 - 286693 | 46343.3 |
| cyclic nucleotide-binding domain-containing protein | M5M_RS01335 | Q96UX3 | + | 286712 - 287725 | 37594.0 |
| duf3524 domain-containing protein | M5M_RS01340 | Q9VXN0 | + | 287735 - 288814 | 40242.6 |
| hypothetical protein | M5M_RS01345 | Not Available | + | 289688 - 290302 | 23475.5 |
| transposase | M5M_RS01350 | Not Available | + | 290585 - 291229 | 24650.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.