Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nrde family protein | M5M_RS13300 | Q29RZ5 | - | 2957998 - 2958771 | 27996.2 |
| prolipoprotein diacylglyceryl transferase | M5M_RS13305 | C5BMA2 | + | 2958847 - 2959677 | 30883.0 |
| abc transporter transmembrane domain-containing protein | M5M_RS13310 | C5BMA3 | + | 2959734 - 2960623 | 33054.9 |
| type 3 dihydrofolate reductase | M5M_RS13315 | P12833 | + | 2960620 - 2961132 | 18531.2 |
| duf3450 domain-containing protein | M5M_RS13320 | Not Available | + | 2961427 - 2962209 | 29223.2 |
| mota/tolq/exbb proton channel family protein | M5M_RS13325 | O27101 | + | 2962209 - 2963582 | 49528.9 |
| mota/tolq/exbb proton channel family protein | M5M_RS13330 | Not Available | + | 2963593 - 2964120 | 18973.4 |
| biopolymer transporter exbd | M5M_RS13335 | Q9ZHV9 | + | 2964173 - 2964571 | 14581.6 |
| energy transducer tonb | M5M_RS13340 | Not Available | + | 2964580 - 2965173 | 21509.1 |
| lipopolysaccharide assembly protein lapb | M5M_RS13345 | Not Available | + | 2965279 - 2966532 | 47837.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.