Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase | M5M_RS13195 | Not Available | + | 2936161 - 2936469 | 12136.4 |
| is3 family transposase | M5M_RS13200 | Not Available | + | 2936466 - 2937332 | 33145.6 |
| hypothetical protein | M5M_RS13205 | Not Available | + | 2937379 - 2938221 | 32374.1 |
| zinc-ribbon domain containing protein | M5M_RS13210 | Not Available | + | 2938403 - 2938816 | 16370.5 |
| hypothetical protein | M5M_RS19960 | Not Available | + | 2938896 - 2939327 | 15242.2 |
| duf6174 domain-containing protein | M5M_RS13215 | Not Available | + | 2939361 - 2939807 | 17645.1 |
| hypothetical protein | M5M_RS13230 | Not Available | + | 2941263 - 2941538 | 9748.04 |
| tetr/acrr family transcriptional regulator | M5M_RS13235 | Not Available | - | 2941637 - 2942176 | 19850.6 |
| glutathione s-transferase family protein | M5M_RS13240 | Not Available | + | 2942262 - 2942903 | 23650.5 |
| hsp70 family protein | M5M_RS13245 | P77319 | + | 2942959 - 2944650 | 61483.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.