Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | + | 2913144 - 2913219 | Not Available |
| hypothetical protein | M5M_RS13030 | Not Available | + | 2913372 - 2913701 | 12318.7 |
| oxidative damage protection protein | M5M_RS13035 | Q21NX9 | - | 2913714 - 2914001 | 10788.7 |
| amino acid abc transporter substrate-binding protein | M5M_RS13040 | Not Available | - | 2913998 - 2914753 | 27596.5 |
| a/g-specific adenine glycosylase | M5M_RS13045 | P17802 | - | 2914771 - 2915829 | 38894.0 |
| asma family protein | M5M_RS13050 | Not Available | - | 2915826 - 2917931 | 74882.4 |
| glycine cleavage system aminomethyltransferase gcvt | M5M_RS13055 | B3PI82 | + | 2918094 - 2919179 | 38949.9 |
| glycine cleavage system protein gcvh | M5M_RS13060 | C5BM96 | + | 2919229 - 2919618 | 13869.7 |
| methylamine utilization protein | M5M_RS13065 | Not Available | + | 2919765 - 2920436 | 24180.2 |
| bifunctional diguanylate cyclase/phosphodiesterase | M5M_RS13070 | Not Available | + | 2920429 - 2922702 | 82583.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.