Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| capsular polysaccharide biosynthesis protein | M5M_RS12970 | Not Available | + | 2902559 - 2903836 | 46481.3 |
| polysaccharide pyruvyl transferase family protein | M5M_RS12975 | Not Available | + | 2903839 - 2904939 | 39800.1 |
| glycosyltransferase family 2 protein | M5M_RS12980 | P11290 | + | 2904944 - 2905879 | 34802.8 |
| hypothetical protein | M5M_RS19635 | Not Available | - | 2905889 - 2906590 | 26219.7 |
| duf3080 domain-containing protein | M5M_RS12990 | Not Available | + | 2906673 - 2907674 | 36323.9 |
| s10 family peptidase | M5M_RS12995 | Not Available | + | 2907736 - 2909214 | 55430.1 |
| fad-binding oxidoreductase | M5M_RS13000 | Not Available | - | 2909204 - 2909647 | 16686.9 |
| fad-dependent oxidoreductase | M5M_RS13005 | P63534 | + | 2909808 - 2911208 | 51697.9 |
| c69 family dipeptidase | M5M_RS13010 | Q8VCA8 | + | 2911208 - 2912236 | 37621.6 |
| pep-cterm sorting domain-containing protein | M5M_RS13015 | Not Available | - | 2912246 - 2912596 | 12729.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.