Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxykinase | M5M_RS12920 | Q2SPF9 | + | 2890729 - 2892279 | 55915.1 |
| glycosyltransferase family 2 protein | M5M_RS12925 | O32268 | - | 2892368 - 2893390 | 38687.3 |
| oligosaccharide flippase family protein | M5M_RS12930 | Not Available | - | 2893392 - 2894660 | 46214.8 |
| sigma-54 dependent transcriptional regulator | M5M_RS12935 | Q87MX7 | - | 2894815 - 2896281 | 53529.0 |
| hypothetical protein | M5M_RS12940 | Not Available | + | 2896358 - 2897155 | 30316.6 |
| wecb/taga/cpsf family glycosyltransferase | M5M_RS19950 | Not Available | + | 2897197 - 2898438 | 45739.6 |
| sugar transferase | M5M_RS12950 | Q02731 | + | 2898606 - 2899271 | 24991.2 |
| hypothetical protein | M5M_RS12955 | Not Available | - | 2899328 - 2899729 | 15017.6 |
| polysaccharide biosynthesis/export family protein | M5M_RS12960 | Not Available | + | 2899940 - 2901208 | 45704.5 |
| hypothetical protein | M5M_RS12965 | Not Available | + | 2901216 - 2902604 | 51716.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.