Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heme no-binding domain-containing protein | M5M_RS12870 | Not Available | + | 2882692 - 2883240 | 20323.6 |
| sensor histidine kinase | M5M_RS12875 | Q06067 | + | 2883227 - 2884192 | 35296.2 |
| abc transporter substrate-binding protein | M5M_RS12880 | Not Available | + | 2884189 - 2884926 | 26944.7 |
| dmt family transporter | M5M_RS12885 | Q9ZE70 | + | 2884923 - 2885807 | 32239.4 |
| hypothetical protein | M5M_RS12890 | Not Available | - | 2885823 - 2886059 | 9065.27 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | M5M_RS12895 | P26264 | - | 2886146 - 2886988 | 30517.1 |
| sensor domain-containing diguanylate cyclase | M5M_RS19630 | Q9HYT3 | + | 2887033 - 2888268 | 44964.5 |
| gmp/imp nucleotidase | M5M_RS12905 | P64636 | + | 2888324 - 2889013 | 26537.1 |
| rna-binding s4 domain-containing protein | M5M_RS12910 | P44754 | + | 2889006 - 2889401 | 14870.8 |
| hsp33 family molecular chaperone hslo | M5M_RS12915 | C5BLL7 | + | 2889477 - 2890376 | 32193.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.