Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| torf family putative porin | M5M_RS12820 | Not Available | + | 2870348 - 2871004 | 23350.4 |
| p-ii family nitrogen regulator | M5M_RS12825 | Q98N18 | + | 2871064 - 2871402 | 12099.6 |
| ammonium transporter | M5M_RS12830 | P54147 | + | 2871439 - 2872671 | 42575.1 |
| p-ii family nitrogen regulator | M5M_RS12835 | P21193 | + | 2872841 - 2873179 | 12132.7 |
| duf523 domain-containing protein | M5M_RS12840 | Not Available | - | 2873232 - 2873744 | 18331.9 |
| hypothetical protein | M5M_RS12845 | A0A0H2ZJC1 | + | 2874143 - 2874490 | 12422.6 |
| tex family protein | M5M_RS12850 | P46837 | - | 2874617 - 2876935 | 84531.1 |
| efflux rnd transporter periplasmic adaptor subunit | M5M_RS12855 | Not Available | + | 2877135 - 2878268 | 40958.4 |
| efflux rnd transporter permease subunit | M5M_RS12860 | A7MHJ0 | + | 2878265 - 2881375 | 113363.0 |
| hd domain-containing phosphohydrolase | M5M_RS12865 | P41789 | - | 2881341 - 2882630 | 47700.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.