Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate--cysteine ligase | M5M_RS12695 | Q21EP1 | - | 2841665 - 2843281 | 60845.1 |
| hypothetical protein | M5M_RS12700 | Not Available | - | 2843321 - 2843716 | 14836.1 |
| efflux rnd transporter periplasmic adaptor subunit | M5M_RS12705 | Not Available | - | 2843794 - 2844888 | 39881.5 |
| efflux rnd transporter permease subunit | M5M_RS12710 | C0Q1F3 | - | 2844904 - 2848008 | 113166.0 |
| lyttr family dna-binding domain-containing protein | M5M_RS12715 | Q9KL96 | - | 2848165 - 2848971 | 30031.2 |
| sensor histidine kinase | M5M_RS12720 | O31516 | - | 2848968 - 2850089 | 42940.2 |
| voc family protein | M5M_RS12725 | Not Available | + | 2850232 - 2850615 | 13378.9 |
| sos response-associated peptidase family protein | M5M_RS12730 | Not Available | - | 2850596 - 2851261 | 24949.8 |
| glycoside hydrolase family 9 protein | M5M_RS12735 | A7LXT3 | + | 2851355 - 2853016 | 60734.0 |
| hypothetical protein | M5M_RS20195 | Not Available | + | 2853672 - 2853989 | 11754.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.