Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoh | M5M_RS12595 | P42378 | + | 2825091 - 2825945 | 32201.3 |
| duf423 domain-containing protein | M5M_RS12600 | P0ADR4 | + | 2826089 - 2826466 | 13162.4 |
| trna (guanosine(46)-n7)-methyltransferase trmb | M5M_RS12605 | Q21EN2 | + | 2826471 - 2827211 | 27525.0 |
| hypothetical protein | M5M_RS12610 | Not Available | + | 2827463 - 2827774 | 11793.2 |
| ompa family protein | M5M_RS12615 | P22263 | + | 2827800 - 2828642 | 29865.7 |
| universal stress protein | M5M_RS12620 | P44195 | - | 2828708 - 2829568 | 31073.1 |
| autotransporter domain-containing esterase | M5M_RS12625 | Q88QS0 | - | 2829682 - 2831625 | 68249.2 |
| abc-f family atp-binding cassette domain-containing protein | M5M_RS12630 | P63390 | - | 2831857 - 2833737 | 69851.7 |
| tigr02444 family protein | M5M_RS12635 | Not Available | + | 2833780 - 2834253 | 17250.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | M5M_RS12640 | P53605 | + | 2834308 - 2835042 | 26074.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.