Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l28 | M5M_RS12545 | C5BLG3 | + | 2818419 - 2818655 | 9086.19 |
| 50s ribosomal protein l33 | M5M_RS12550 | B3PG60 | + | 2818673 - 2818828 | 6053.47 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | M5M_RS12555 | Q9RPT0 | + | 2818884 - 2819606 | 25859.3 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | M5M_RS12560 | B3PG51 | + | 2819599 - 2820414 | 29756.2 |
| hypothetical protein | M5M_RS12565 | Not Available | + | 2820574 - 2820891 | 10791.3 |
| pantetheine-phosphate adenylyltransferase | M5M_RS12570 | C5BLM4 | - | 2820976 - 2821455 | 17774.6 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | M5M_RS12575 | P0ADY0 | - | 2821540 - 2822130 | 21293.3 |
| signal recognition particle-docking protein ftsy | M5M_RS12580 | P44870 | + | 2822260 - 2823300 | 36731.2 |
| cell division atp-binding protein ftse | M5M_RS12585 | P0A9R9 | + | 2823297 - 2823977 | 25303.7 |
| permease-like cell division protein ftsx | M5M_RS12590 | Q9R9Y4 | + | 2823970 - 2824950 | 35117.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.