Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoid occlusion factor slma | M5M_RS12495 | A1S2C9 | - | 2806510 - 2807121 | 23238.3 |
| acetylglutamate kinase | M5M_RS12500 | B3PG71 | - | 2807243 - 2808145 | 31651.9 |
| phosphomannomutase/phosphoglucomutase | M5M_RS20805 | Q02E40 | - | 2808181 - 2810610 | 88434.9 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | M5M_RS12510 | Q7MPS9 | - | 2810637 - 2811848 | 42102.6 |
| dna repair protein radc | M5M_RS12515 | B3PG68 | + | 2811955 - 2812629 | 24546.8 |
| mitochondrial fission elm1 family protein | M5M_RS12520 | Not Available | + | 2812659 - 2813630 | 35514.6 |
| glycosyltransferase | M5M_RS12525 | P9WMZ2 | + | 2813634 - 2814668 | 37868.3 |
| glycosyltransferase family 4 protein | M5M_RS12530 | Not Available | - | 2814647 - 2815756 | 41098.4 |
| yrbl family protein | M5M_RS12535 | Not Available | - | 2815753 - 2816859 | 41717.6 |
| o-antigen ligase family protein | M5M_RS12540 | Not Available | - | 2816935 - 2818170 | 45942.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.