Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| csiv family protein | M5M_RS01205 | Not Available | - | 259558 - 260505 | 35239.7 |
| transcription-repair coupling factor | M5M_RS01210 | P30958 | - | 260510 - 263938 | 126910.0 |
| glyceraldehyde-3-phosphate dehydrogenase | M5M_RS01215 | Q02PG5 | + | 264201 - 265652 | 53430.2 |
| na(+)-translocating nadh-quinone reductase subunit a | M5M_RS01220 | Q21JS2 | + | 266058 - 267404 | 48389.1 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | M5M_RS01225 | A4VMV3 | + | 267406 - 268611 | 43805.9 |
| na(+)-translocating nadh-quinone reductase subunit c | M5M_RS01230 | Q9HZK8 | + | 268604 - 269365 | 27294.8 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | M5M_RS01235 | B7UZU0 | + | 269369 - 270025 | 23603.8 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | M5M_RS01240 | C5BII5 | + | 270029 - 270643 | 21824.7 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | M5M_RS01245 | Q9HZL1 | + | 270662 - 271885 | 45406.5 |
| fad:protein fmn transferase | M5M_RS01250 | A5F5Y3 | + | 272022 - 272936 | 32177.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.