Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit i | M5M_RS19925 | P0A103 | + | 2758620 - 2758955 | 11988.0 |
| f0f1 atp synthase subunit a | M5M_RS12255 | Q21DK2 | + | 2759016 - 2759942 | 34176.5 |
| f0f1 atp synthase subunit c | M5M_RS12260 | Q12HP6 | + | 2759993 - 2760241 | 8114.41 |
| f0f1 atp synthase subunit b | M5M_RS12265 | Q2S6N7 | + | 2760295 - 2760765 | 16969.3 |
| f0f1 atp synthase subunit delta | M5M_RS12270 | A6VF35 | + | 2760776 - 2761312 | 18876.7 |
| f0f1 atp synthase subunit alpha | M5M_RS12275 | Q21DK6 | + | 2761336 - 2762880 | 55041.1 |
| f0f1 atp synthase subunit gamma | M5M_RS12280 | Q21DK7 | + | 2762936 - 2763796 | 31313.9 |
| f0f1 atp synthase subunit beta | M5M_RS12285 | C5BKJ5 | + | 2763843 - 2765225 | 49566.7 |
| f0f1 atp synthase subunit epsilon | M5M_RS12290 | A1U7H3 | + | 2765250 - 2765675 | 15137.9 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | M5M_RS12295 | B3PIS4 | + | 2765809 - 2767173 | 49078.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.