Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium transporter trka | M5M_RS12160 | E1V6C6 | + | 2734326 - 2735711 | 50547.8 |
| trkh family potassium uptake protein | M5M_RS12165 | E1V6C5 | + | 2735729 - 2737177 | 53436.2 |
| lysophospholipid acyltransferase family protein | M5M_RS12170 | Not Available | - | 2737178 - 2738089 | 34315.4 |
| glycine--trna ligase subunit alpha | M5M_RS12175 | Q21PU3 | + | 2738227 - 2739180 | 36257.0 |
| glycine--trna ligase subunit beta | M5M_RS12180 | A1TWM6 | + | 2739177 - 2741258 | 75715.2 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | M5M_RS12185 | Q7WG29 | + | 2741262 - 2741831 | 19951.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | M5M_RS12190 | Not Available | + | 2741837 - 2742550 | 26495.1 |
| dna topoisomerase (atp-hydrolyzing) subunit b | M5M_RS12195 | Q9I7C2 | - | 2742609 - 2745023 | 88782.6 |
| dna replication/repair protein recf | M5M_RS12200 | B3PEM4 | - | 2745039 - 2746142 | 41093.2 |
| dna polymerase iii subunit beta | M5M_RS12205 | P0A120 | - | 2746181 - 2747284 | 40446.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.