Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS12060 | Not Available | - | 2714999 - 2715652 | 24835.8 |
| surf1 family protein | M5M_RS12065 | Not Available | - | 2715639 - 2716394 | 27850.0 |
| twin transmembrane helix small protein | M5M_RS12070 | Not Available | + | 2716471 - 2716698 | 8140.18 |
| cytochrome c oxidase subunit 3 | M5M_RS12075 | P06030 | - | 2716717 - 2717637 | 34232.3 |
| cytochrome c oxidase assembly protein | M5M_RS12080 | Not Available | - | 2717657 - 2718241 | 21380.7 |
| cytochrome c oxidase subunit i | M5M_RS12085 | Q4ULU5 | - | 2718248 - 2719798 | 57567.8 |
| cytochrome c oxidase subunit ii | M5M_RS12090 | Q1RI44 | - | 2719812 - 2720945 | 41799.0 |
| mate family efflux transporter | M5M_RS12095 | P28303 | + | 2721382 - 2722689 | 47648.6 |
| hypothetical protein | M5M_RS12100 | Not Available | + | 2723002 - 2723760 | 28502.3 |
| yhev family putative zinc ribbon protein | M5M_RS12105 | Not Available | - | 2723768 - 2723998 | 8817.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.