Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS12010 | Not Available | + | 2703108 - 2703290 | 6692.29 |
| abc transporter substrate-binding protein | M5M_RS12015 | Not Available | - | 2703406 - 2704269 | 32776.8 |
| aromatic amino acid hydroxylase | M5M_RS12020 | Q9KLB8 | - | 2704293 - 2706050 | 65273.8 |
| ycjf family protein | M5M_RS12025 | Not Available | - | 2706216 - 2707193 | 35124.5 |
| ycjx family protein | M5M_RS12030 | P44280 | - | 2707190 - 2708626 | 53908.6 |
| bifunctional diguanylate cyclase/phosphodiesterase | M5M_RS19610 | Not Available | - | 2708713 - 2710797 | 77754.1 |
| yfir family protein | M5M_RS12040 | Not Available | - | 2710797 - 2711273 | 17230.6 |
| tonb-dependent siderophore receptor | M5M_RS12045 | P0C6R0 | - | 2711279 - 2713300 | 74503.3 |
| sco family protein | M5M_RS12050 | P47206 | - | 2713393 - 2714043 | 24640.9 |
| heme o synthase | M5M_RS12055 | Q21PS1 | - | 2714052 - 2714960 | 33294.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.