Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS11875 | Not Available | - | 2671893 - 2672174 | 10156.1 |
| tetratricopeptide repeat protein | M5M_RS11880 | Not Available | - | 2672171 - 2672884 | 26201.1 |
| tetratricopeptide repeat protein | M5M_RS11885 | Not Available | - | 2672871 - 2675774 | 110032.0 |
| tetratricopeptide repeat protein | M5M_RS11890 | Not Available | - | 2675777 - 2677636 | 69901.4 |
| hypothetical protein | M5M_RS11895 | Not Available | - | 2677639 - 2678157 | 19226.2 |
| fad:protein fmn transferase | M5M_RS11900 | Not Available | - | 2678342 - 2679232 | 32233.5 |
| type ii secretion system protein n | M5M_RS19605 | Not Available | - | 2679319 - 2680098 | 27780.9 |
| type ii secretion system protein m | M5M_RS20190 | Not Available | - | 2680107 - 2680259 | 5498.72 |
| type ii secretion system protein gspm | M5M_RS11910 | Not Available | - | 2680210 - 2680596 | 13574.6 |
| type ii secretion system protein gspl | M5M_RS11915 | Not Available | - | 2680593 - 2681867 | 46918.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.