Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ph domain-containing protein | M5M_RS11825 | Not Available | - | 2662830 - 2663216 | 14306.5 |
| mechanosensitive ion channel family protein | M5M_RS11830 | Q55717 | - | 2663306 - 2664136 | 29527.1 |
| glucose-6-phosphate isomerase | M5M_RS11835 | A6W2I5 | + | 2664249 - 2665874 | 60023.5 |
| trna-uridine aminocarboxypropyltransferase | M5M_RS11840 | Q47319 | + | 2665932 - 2666657 | 27148.4 |
| tetratricopeptide repeat protein | M5M_RS11845 | Not Available | - | 2666632 - 2668434 | 65567.6 |
| zinc ribbon domain-containing protein yjdm | M5M_RS11850 | P0AFJ3 | - | 2668445 - 2668786 | 12098.5 |
| agmx/pgli c-terminal domain-containing protein | M5M_RS11855 | Not Available | - | 2669033 - 2669983 | 34676.1 |
| biopolymer transporter exbd | M5M_RS11860 | Not Available | - | 2669994 - 2670509 | 18928.0 |
| biopolymer transporter exbd | M5M_RS11865 | Not Available | - | 2670506 - 2671063 | 20327.3 |
| mota/tolq/exbb proton channel family protein | M5M_RS11870 | Not Available | - | 2671116 - 2671778 | 23784.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.