Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | M5M_RS11725 | Q9I2S7 | - | 2638518 - 2640467 | 72203.4 |
| cpxcg motif-containing cysteine-rich protein | M5M_RS19905 | Not Available | + | 2640621 - 2640803 | 6670.89 |
| hypothetical protein | M5M_RS11735 | Not Available | + | 2640875 - 2641456 | 22381.9 |
| hypothetical protein | M5M_RS11740 | Not Available | - | 2641460 - 2641906 | 16104.4 |
| putative hydro-lyase | M5M_RS11745 | P61788 | + | 2642027 - 2642818 | 28485.1 |
| 5-oxoprolinase subunit pxpa | M5M_RS11750 | Q9I203 | + | 2642819 - 2643568 | 27279.8 |
| 5-oxoprolinase subunit pxpb | M5M_RS11755 | P60495 | + | 2643561 - 2644250 | 24686.8 |
| biotin-dependent carboxyltransferase family protein | M5M_RS11760 | Q7WY77 | + | 2644247 - 2645194 | 33268.0 |
| duf4392 domain-containing protein | M5M_RS11765 | Q8BH86 | + | 2645191 - 2646051 | 30679.3 |
| d-amino acid aminotransferase | M5M_RS11770 | G2JZ74 | + | 2646265 - 2647122 | 31717.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.