Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster repair protein ytfe | M5M_RS11485 | Q6D142 | + | 2594581 - 2595279 | 25556.7 |
| tetr/acrr family transcriptional regulator | M5M_RS11490 | Not Available | - | 2595276 - 2595890 | 23038.8 |
| mbl fold metallo-hydrolase | M5M_RS11495 | P9WKP2 | + | 2595992 - 2597062 | 39043.6 |
| alpha/beta fold hydrolase | M5M_RS11500 | Not Available | + | 2597154 - 2597900 | 26844.8 |
| metal abc transporter substrate-binding protein | M5M_RS11505 | P39172 | - | 2597859 - 2598701 | 30307.5 |
| fur family transcriptional regulator | M5M_RS11510 | P0AC51 | + | 2598766 - 2599248 | 17647.2 |
| zinc abc transporter atp-binding protein znuc | M5M_RS11515 | A1JRI2 | + | 2599245 - 2599994 | 27047.8 |
| zinc abc transporter permease subunit znub | M5M_RS11520 | P39832 | + | 2599997 - 2600779 | 27161.7 |
| duf4349 domain-containing protein | M5M_RS11525 | Not Available | - | 2600810 - 2601607 | 29521.5 |
| hypothetical protein | M5M_RS11530 | Not Available | - | 2601696 - 2602010 | 11827.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
