Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | M5M_RS11285 | P23883 | - | 2550694 - 2552187 | 52655.7 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | M5M_RS11295 | Q2RSB2 | + | 2552648 - 2553805 | 41307.1 |
| nad(p) transhydrogenase subunit alpha | M5M_RS11300 | Q2RSB3 | + | 2553822 - 2554130 | 10573.3 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | M5M_RS11305 | Q2RSB4 | + | 2554127 - 2555494 | 47564.9 |
| zf-tfiib domain-containing protein | M5M_RS11310 | Not Available | - | 2556078 - 2556620 | 20149.9 |
| dna repair atpase | M5M_RS11315 | Not Available | - | 2556624 - 2561864 | 195528.0 |
| flotillin family protein | M5M_RS11320 | Not Available | - | 2561939 - 2563915 | 72540.4 |
| hypothetical protein | M5M_RS11325 | Not Available | - | 2563944 - 2564636 | 25321.1 |
| pspa/im30 family protein | M5M_RS11330 | P0AF79 | - | 2564673 - 2565365 | 25097.9 |
| yjfi family protein | M5M_RS11335 | Not Available | - | 2565378 - 2565974 | 22117.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
