Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfite exporter taue/safe family protein | M5M_RS01005 | Not Available | + | 213229 - 213984 | 25681.5 |
| cytochrome b | M5M_RS01010 | Not Available | - | 214019 - 214543 | 19694.6 |
| batd family protein | M5M_RS01015 | Not Available | - | 214648 - 216321 | 61183.7 |
| vwa domain-containing protein | M5M_RS01020 | Q5YU15 | - | 216308 - 218317 | 73533.7 |
| vwa domain-containing protein | M5M_RS01025 | Not Available | - | 218314 - 219297 | 36217.9 |
| duf4381 domain-containing protein | M5M_RS19230 | Not Available | - | 219311 - 219787 | 17955.9 |
| duf58 domain-containing protein | M5M_RS01035 | P9WLX4 | - | 219784 - 220707 | 34111.5 |
| moxr family atpase | M5M_RS01040 | Not Available | - | 220715 - 221674 | 35553.9 |
| nad-glutamate dehydrogenase | M5M_RS01045 | Q9HZE0 | + | 221940 - 226814 | 183472.0 |
| duf2835 domain-containing protein | M5M_RS01050 | Not Available | + | 226814 - 227050 | 8715.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.