Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(+) kinase | M5M_RS00955 | C1DPY6 | + | 202890 - 203771 | 32163.8 |
| metallophosphoesterase | M5M_RS00960 | Q65LA0 | + | 203784 - 204755 | 36981.6 |
| rhomboid family intramembrane serine protease | M5M_RS00965 | B5XTR5 | + | 204764 - 205645 | 32798.2 |
| yeac family protein | M5M_RS00970 | Not Available | + | 205642 - 205911 | 10174.0 |
| duf2797 domain-containing protein | M5M_RS00975 | Not Available | + | 205911 - 206750 | 30574.0 |
| aminopeptidase n | M5M_RS00980 | Q8H0S9 | + | 206751 - 209363 | 97731.7 |
| duf4124 domain-containing protein | M5M_RS00985 | Not Available | + | 209539 - 210207 | 25396.4 |
| pilin | M5M_RS00990 | Not Available | - | 210211 - 210702 | 17898.9 |
| hypothetical protein | M5M_RS00995 | Not Available | - | 210765 - 211316 | 20384.8 |
| hdod domain-containing protein | M5M_RS01000 | Not Available | + | 211441 - 213165 | 62568.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.