Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS20295 | Not Available | - | 193169 - 193345 | 6645.53 |
| hypothetical protein | M5M_RS00910 | Not Available | - | 193365 - 193787 | 15582.5 |
| hypothetical protein | M5M_RS00915 | Not Available | - | 193784 - 194299 | 18633.1 |
| hypothetical protein | M5M_RS00920 | Not Available | - | 194296 - 195087 | 28827.6 |
| hypothetical protein | M5M_RS20905 | Not Available | + | 195474 - 195602 | 4703.61 |
| atp-binding protein | M5M_RS00930 | Not Available | - | 195787 - 197235 | 53363.1 |
| hypothetical protein | M5M_RS00935 | Not Available | + | 198405 - 199718 | 49757.0 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | M5M_RS00940 | Not Available | + | 199736 - 200695 | 34249.3 |
| cyclic nucleotide-binding domain-containing protein | M5M_RS00945 | P36600 | + | 200825 - 201937 | 41512.8 |
| duf1853 family protein | M5M_RS19225 | Not Available | - | 201939 - 202799 | 32631.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.