Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | M5M_RS07820 | O33533 | - | 1769208 - 1771592 | 84927.0 |
| fixh family protein | M5M_RS07825 | Not Available | - | 1771596 - 1772123 | 20127.9 |
| cytochrome c oxidase accessory protein ccog | M5M_RS07830 | P18396 | - | 1772191 - 1773609 | 54120.5 |
| cytochrome-c oxidase, cbb3-type subunit iii | M5M_RS07835 | Q8KS19 | - | 1773710 - 1774636 | 34119.7 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | M5M_RS07840 | Not Available | - | 1774633 - 1774836 | 7757.09 |
| cytochrome-c oxidase, cbb3-type subunit ii | M5M_RS07845 | Not Available | - | 1774839 - 1775450 | 22507.2 |
| cytochrome-c oxidase, cbb3-type subunit i | M5M_RS07850 | D9IA43 | - | 1775462 - 1776901 | 53188.2 |
| argininosuccinate synthase | M5M_RS07855 | Q21HZ6 | - | 1777186 - 1778406 | 45239.9 |
| ompa family protein | M5M_RS07860 | Not Available | - | 1778541 - 1779443 | 33631.1 |
| dihydroorotase | M5M_RS07865 | C5BNK6 | + | 1779584 - 1780618 | 37194.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
