Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphodiester glycosidase family protein | M5M_RS07665 | Not Available | + | 1737065 - 1737997 | 33064.7 |
| l,d-transpeptidase | M5M_RS07670 | Not Available | - | 1737984 - 1738742 | 27411.8 |
| serine hydrolase | M5M_RS07675 | Not Available | - | 1738743 - 1740026 | 45516.8 |
| glycoside hydrolase family 3 protein | M5M_RS07680 | P48823 | - | 1740007 - 1741953 | 69378.5 |
| c39 family peptidase | M5M_RS07685 | Not Available | - | 1741968 - 1742606 | 23902.1 |
| c39 family peptidase | M5M_RS20970 | Not Available | - | 1742620 - 1744155 | 55868.4 |
| c39 family peptidase | M5M_RS07695 | Not Available | - | 1744234 - 1746135 | 69321.4 |
| tonb-dependent receptor | M5M_RS07700 | Not Available | + | 1746952 - 1749303 | 86651.3 |
| duf3943 domain-containing protein | M5M_RS20490 | Not Available | - | 1749400 - 1750359 | 36191.9 |
| dmt family transporter | M5M_RS07710 | Not Available | + | 1750682 - 1751635 | 34015.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
