Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS07615 | Not Available | - | 1724017 - 1725291 | 47875.4 |
| s41 family peptidase | M5M_RS07620 | Not Available | - | 1725354 - 1726826 | 54117.4 |
| hypothetical protein | M5M_RS07625 | Not Available | - | 1726958 - 1728454 | 56779.0 |
| hypothetical protein | M5M_RS07630 | Not Available | - | 1728485 - 1729396 | 34458.9 |
| amidase | M5M_RS07635 | O28325 | - | 1729472 - 1730917 | 52589.6 |
| lysr family transcriptional regulator | M5M_RS07640 | P0DUU5 | + | 1731078 - 1731986 | 32966.2 |
| mfs transporter | M5M_RS07645 | Not Available | + | 1732303 - 1733469 | 41140.2 |
| m1 family metallopeptidase | M5M_RS07650 | Not Available | + | 1733466 - 1735532 | 76288.3 |
| c40 family peptidase | M5M_RS07655 | Not Available | + | 1735529 - 1736053 | 19144.9 |
| n-acetylmuramoyl-l-alanine amidase | M5M_RS07660 | P75820 | + | 1736083 - 1736994 | 34345.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
