Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | M5M_RS07565 | A8ADG3 | - | 1710086 - 1710865 | 28821.8 |
| dipeptide epimerase | M5M_RS07570 | Q97MK4 | - | 1710878 - 1711972 | 39350.1 |
| sh3 domain-containing protein | M5M_RS07575 | Not Available | - | 1711982 - 1713355 | 50092.5 |
| tonb-dependent receptor | M5M_RS07580 | Not Available | - | 1713713 - 1716346 | 95614.2 |
| n-acetylmuramoyl-l-alanine amidase | M5M_RS07585 | Not Available | + | 1716477 - 1717433 | 35962.3 |
| hypothetical protein | M5M_RS07590 | Not Available | + | 1717556 - 1718308 | 27012.4 |
| duf6624 domain-containing protein | M5M_RS07595 | Not Available | + | 1718325 - 1719029 | 26961.5 |
| hypothetical protein | M5M_RS07600 | Not Available | + | 1719534 - 1720064 | 20163.5 |
| hypothetical protein | M5M_RS07605 | Not Available | - | 1720344 - 1721942 | 57497.2 |
| hypothetical protein | M5M_RS07610 | Not Available | - | 1722241 - 1723767 | 57612.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
