Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase family protein | M5M_RS07515 | Q68CP4 | - | 1696153 - 1697325 | 43590.3 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | M5M_RS07520 | P40407 | - | 1697322 - 1698479 | 42098.6 |
| diaminopimelate decarboxylase | M5M_RS07525 | Not Available | - | 1698479 - 1699729 | 44898.8 |
| m15 family metallopeptidase | M5M_RS07530 | Q9XAK6 | - | 1699726 - 1700427 | 25542.3 |
| na+/h+ antiporter nhac family protein | M5M_RS07535 | P44263 | - | 1700447 - 1701838 | 48472.1 |
| ld-carboxypeptidase | M5M_RS07540 | O34851 | - | 1702017 - 1703042 | 36879.4 |
| tonb-dependent receptor | M5M_RS07545 | Not Available | - | 1703186 - 1706221 | 111346.0 |
| transglutaminase-like domain-containing protein | M5M_RS07550 | Not Available | + | 1706374 - 1707768 | 53323.9 |
| abc transporter substrate-binding protein | M5M_RS07555 | Not Available | + | 1707820 - 1708656 | 31359.1 |
| tryptophan halogenase family protein | M5M_RS07560 | P95480 | - | 1708647 - 1710089 | 52608.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
