Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter | M5M_RS07460 | Q9Y289 | + | 1684009 - 1685574 | 56002.9 |
| badf/badg/bcra/bcrd atpase family protein | M5M_RS07465 | Not Available | + | 1685571 - 1686440 | 30088.1 |
| anhydro-n-acetylmuramic acid kinase | M5M_RS07470 | Q21LT1 | + | 1686440 - 1687546 | 38883.6 |
| n-acetylmuramic acid 6-phosphate etherase | M5M_RS07475 | Q9KU39 | + | 1687536 - 1688453 | 32449.2 |
| dienelactone hydrolase family protein | M5M_RS07485 | Q7DFU6 | + | 1689272 - 1690174 | 33266.4 |
| duf871 domain-containing protein | M5M_RS07490 | Not Available | - | 1690247 - 1690924 | 24257.6 |
| m14 family zinc carboxypeptidase | M5M_RS07495 | Not Available | - | 1691035 - 1692405 | 50521.4 |
| glycolate oxidase subunit glcf | M5M_RS07500 | P52074 | - | 1692431 - 1693660 | 43934.9 |
| fad-binding protein | M5M_RS19440 | P52073 | - | 1693651 - 1694712 | 38863.7 |
| fad-linked oxidase c-terminal domain-containing protein | M5M_RS07510 | P0AEQ0 | - | 1694705 - 1696153 | 51983.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.