Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| php domain-containing protein | M5M_RS00710 | P44176 | + | 154011 - 154901 | 31048.2 |
| l-threonylcarbamoyladenylate synthase | M5M_RS00715 | P45103 | + | 154911 - 155537 | 23368.1 |
| scpa family protein | M5M_RS00720 | Q87BI4 | + | 155623 - 156582 | 36059.2 |
| smc-scp complex subunit scpb | M5M_RS00725 | Q83CP9 | + | 156584 - 157495 | 33311.1 |
| 23s rrna pseudouridine(2605) synthase rlub | M5M_RS00730 | Q9HZ55 | + | 157492 - 158385 | 34132.9 |
| abc transporter transmembrane domain-containing protein | M5M_RS00735 | Q9HUN6 | + | 158473 - 160624 | 78805.9 |
| yaeq family protein | M5M_RS00740 | P0A1S7 | + | 160624 - 161154 | 19805.6 |
| diguanylate cyclase domain-containing protein | M5M_RS00745 | Not Available | - | 161141 - 161851 | 26938.7 |
| atp-binding protein | M5M_RS00750 | Q04804 | - | 161935 - 163323 | 52475.5 |
| response regulator transcription factor | M5M_RS00755 | P0AE89 | - | 163320 - 164009 | 25142.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.