Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosome-binding factor rbfa | M5M_RS07265 | C5BPV8 | - | 1644266 - 1644655 | 14606.2 |
| translation initiation factor if-2 | M5M_RS07270 | Q21H61 | - | 1644713 - 1647409 | 97507.1 |
| transcription termination factor nusa | M5M_RS07275 | P0AFF8 | - | 1647424 - 1648929 | 55705.4 |
| ribosome maturation factor rimp | M5M_RS07280 | B0KHY0 | - | 1648962 - 1649417 | 16933.3 |
| Trna-met | Not Available | Not Available | + | 1649676 - 1649752 | Not Available |
| Trna-leu | Not Available | Not Available | + | 1650268 - 1650352 | Not Available |
| preprotein translocase subunit secg | M5M_RS07295 | Q9HV52 | - | 1650375 - 1650728 | 11864.2 |
| triose-phosphate isomerase | M5M_RS07300 | A1TLL4 | - | 1650769 - 1651506 | 25532.7 |
| phosphoglucosamine mutase | M5M_RS07305 | B3PLQ1 | - | 1651656 - 1652996 | 47562.6 |
| dihydropteroate synthase | M5M_RS07310 | P0AC14 | - | 1653067 - 1653915 | 29492.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.