Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tfox/sxy family protein | M5M_RS07165 | Not Available | + | 1625388 - 1625669 | 10003.0 |
| crp/fnr family transcriptional regulator | M5M_RS07170 | Not Available | + | 1625694 - 1626470 | 28582.1 |
| protease htpx | M5M_RS07175 | B3PJ06 | + | 1626568 - 1627458 | 31971.1 |
| rieske (2fe-2s) protein | M5M_RS07180 | Not Available | + | 1627500 - 1627844 | 12697.2 |
| dna/rna nuclease sfsa | M5M_RS07185 | A3QHP6 | - | 1627813 - 1628520 | 25677.8 |
| rna polymerase-binding protein dksa | M5M_RS07190 | P0ABS3 | + | 1628700 - 1629143 | 17049.2 |
| trna glutamyl-q(34) synthetase gluqrs | M5M_RS07195 | A8GIZ1 | + | 1629192 - 1630091 | 33370.7 |
| hypothetical protein | M5M_RS07200 | Not Available | + | 1630161 - 1630343 | 7143.99 |
| atp-binding protein | M5M_RS07205 | Not Available | + | 1630333 - 1633302 | 109154.0 |
| sigma-54 dependent transcriptional regulator | M5M_RS07210 | Q9APD9 | + | 1633367 - 1634752 | 50977.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.