Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium-translocating pyrophosphatase | M5M_RS07110 | Q898Q9 | - | 1615816 - 1617834 | 68243.4 |
| inorganic diphosphatase | M5M_RS07115 | P0A7B0 | + | 1618118 - 1618666 | 20222.3 |
| hypothetical protein | M5M_RS19425 | Not Available | - | 1618747 - 1619253 | 17359.5 |
| hypothetical protein | M5M_RS07130 | Not Available | + | 1619665 - 1619883 | 8477.99 |
| rimk/lysx family protein | M5M_RS07135 | Q7U6F4 | + | 1619979 - 1620644 | 24535.8 |
| inactive transglutaminase family protein | M5M_RS07140 | Not Available | + | 1620668 - 1622212 | 57112.0 |
| alpha-l-glutamate ligase-like protein | M5M_RS07145 | Not Available | + | 1622209 - 1623198 | 36216.9 |
| serine o-acetyltransferase | M5M_RS07150 | P0A9D6 | - | 1623174 - 1623962 | 27754.4 |
| had family phosphatase | M5M_RS07155 | Not Available | - | 1624049 - 1624603 | 19593.8 |
| m15 family metallopeptidase | M5M_RS07160 | Not Available | - | 1624603 - 1625280 | 24943.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.