Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lon peptidase substrate-binding domain-containing protein | M5M_RS07060 | Not Available | - | 1601083 - 1601664 | 21232.7 |
| rnd family transporter | M5M_RS07065 | Not Available | - | 1601664 - 1604222 | 94244.7 |
| fha domain-containing protein | M5M_RS07070 | Not Available | + | 1604445 - 1605278 | 30510.5 |
| 2-hydroxyacid dehydrogenase | M5M_RS07075 | P45250 | + | 1605296 - 1606261 | 34313.5 |
| pep-cterm sorting domain-containing protein | M5M_RS07080 | Not Available | + | 1606410 - 1607075 | 23766.8 |
| pp2c family serine/threonine-protein phosphatase | M5M_RS07085 | Q71YJ5 | - | 1607158 - 1607868 | 25706.8 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | M5M_RS07090 | P37773 | - | 1607865 - 1609217 | 48611.4 |
| 6-phosphofructokinase | M5M_RS07095 | E1VB09 | + | 1609387 - 1610643 | 45264.7 |
| peptide-methionine (s)-s-oxide reductase msra | M5M_RS07100 | Q92LI5 | - | 1610663 - 1611268 | 22733.6 |
| response regulator | M5M_RS19420 | Not Available | + | 1611460 - 1615731 | 158037.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.