Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipoyl(octanoyl) transferase lipb | M5M_RS07010 | B3PKN9 | - | 1591392 - 1592084 | 25355.5 |
| ybed family protein | M5M_RS07015 | Q02SG5 | - | 1592084 - 1592356 | 10085.2 |
| d-alanyl-d-alanine carboxypeptidase family protein | M5M_RS07020 | P0AEB4 | - | 1592459 - 1593634 | 42368.8 |
| septal ring lytic transglycosylase rlpa family protein | M5M_RS07025 | A0A0H2ZFV1 | - | 1593660 - 1594583 | 33524.6 |
| lytic murein transglycosylase b | M5M_RS07030 | P41052 | - | 1594601 - 1595593 | 36395.0 |
| rod shape-determining protein roda | M5M_RS07035 | P0ABG8 | - | 1595720 - 1596865 | 41620.8 |
| penicillin-binding protein 2 | M5M_RS07040 | P0AD67 | - | 1596862 - 1598754 | 70211.1 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | M5M_RS07045 | A6VZ82 | - | 1598864 - 1599331 | 17203.8 |
| ribosome silencing factor | M5M_RS07050 | Q02SH2 | - | 1599331 - 1599666 | 12279.8 |
| glutamate-5-semialdehyde dehydrogenase | M5M_RS07055 | C5BNN0 | - | 1599763 - 1601016 | 44233.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.