Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dmt family protein | M5M_RS06960 | Not Available | - | 1580534 - 1580881 | 13144.7 |
| mgtc/sapb family protein | M5M_RS06965 | P0AFV3 | - | 1580883 - 1581374 | 17027.2 |
| type iii plp-dependent enzyme | M5M_RS06970 | P27121 | + | 1581636 - 1582805 | 43528.1 |
| alkyl/aryl-sulfatase | M5M_RS06975 | Not Available | + | 1582916 - 1584943 | 74484.5 |
| 30s ribosomal protein s12 methylthiotransferase rimo | M5M_RS06980 | B4F137 | - | 1585091 - 1586422 | 49059.7 |
| glycerophosphodiester phosphodiesterase | M5M_RS06985 | Not Available | + | 1586594 - 1587310 | 26574.9 |
| hypothetical protein | M5M_RS06990 | Not Available | - | 1587319 - 1587630 | 11703.1 |
| thioredoxin domain-containing protein | M5M_RS06995 | P37512 | - | 1587639 - 1589705 | 77538.8 |
| gnat family n-acetyltransferase | M5M_RS19415 | Not Available | - | 1589897 - 1590397 | 17856.7 |
| lipoyl synthase | M5M_RS07005 | A4VQZ6 | - | 1590372 - 1591373 | 37724.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.