Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | M5M_RS00660 | A1TG08 | - | 146061 - 146837 | 28004.8 |
| rossmann-like and duf2520 domain-containing protein | M5M_RS00665 | Not Available | - | 146830 - 147735 | 31825.7 |
| tetratricopeptide repeat protein | M5M_RS00670 | Not Available | + | 148022 - 149407 | 51517.2 |
| ankyrin repeat domain-containing protein | M5M_RS00675 | Not Available | + | 149417 - 150223 | 30030.1 |
| cbs domain-containing protein | M5M_RS00680 | Not Available | - | 150275 - 150694 | 15365.7 |
| pyridoxine 5'-phosphate synthase | M5M_RS00685 | Q8PRF1 | - | 150803 - 151567 | 27359.6 |
| peptidylprolyl isomerase | M5M_RS00690 | P0AFL5 | - | 151597 - 152148 | 20198.3 |
| tigr04211 family sh3 domain-containing protein | M5M_RS00695 | Not Available | - | 152162 - 152848 | 25938.7 |
| ycii family protein | M5M_RS00700 | P0AB56 | - | 152921 - 153220 | 10600.7 |
| vc0807 family protein | M5M_RS00705 | Not Available | - | 153245 - 153952 | 26331.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.