Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS06860 | Not Available | - | 1563941 - 1564426 | 16874.2 |
| beta-ketoacyl-acp synthase | M5M_RS06865 | P06231 | - | 1564413 - 1565594 | 40728.9 |
| nad(p)/fad-dependent oxidoreductase | M5M_RS06870 | Q2UPC7 | - | 1565591 - 1566823 | 45010.9 |
| duf3261 domain-containing protein | M5M_RS06875 | Not Available | - | 1566820 - 1567380 | 20605.9 |
| methyltransferase | M5M_RS06880 | Not Available | - | 1567380 - 1568465 | 40012.6 |
| mmpl family transporter | M5M_RS06885 | Not Available | - | 1568481 - 1570712 | 81378.0 |
| outer membrane lipoprotein carrier protein lola | M5M_RS06890 | Not Available | - | 1570709 - 1571278 | 21138.4 |
| thioesterase family protein | M5M_RS06895 | Not Available | - | 1571275 - 1571712 | 16295.8 |
| histidine ammonia-lyase | M5M_RS06900 | C5D4K1 | - | 1571712 - 1573244 | 55024.3 |
| lipid a biosynthesis acyltransferase | M5M_RS06905 | Not Available | - | 1573241 - 1574119 | 33345.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.