Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | M5M_RS06760 | Not Available | + | 1543380 - 1544297 | 32805.7 |
| hypothetical protein | M5M_RS06765 | Not Available | + | 1544294 - 1544473 | 6108.48 |
| duf6122 family protein | M5M_RS06770 | Not Available | - | 1544451 - 1544798 | 13217.5 |
| biosynthetic arginine decarboxylase | M5M_RS06775 | A1TY02 | + | 1545019 - 1546908 | 70083.2 |
| duf3313 family protein | M5M_RS06780 | Not Available | - | 1546959 - 1547555 | 22018.3 |
| universal stress protein | M5M_RS06785 | Not Available | - | 1547680 - 1548513 | 30948.9 |
| co-chaperone djla | M5M_RS06790 | Q45885 | - | 1548679 - 1549461 | 28855.1 |
| hypothetical protein | M5M_RS06795 | Not Available | - | 1549479 - 1550552 | 39542.3 |
| hypothetical protein | M5M_RS06800 | Not Available | - | 1550610 - 1551293 | 25755.8 |
| thiamine pyrophosphate-binding protein | M5M_RS06805 | P37251 | - | 1551389 - 1553119 | 61382.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.